Sergey

This plugin gives you option to choose which payment gateways will be disabled when certain shipping method selected. 
Say, you can disable Cash on Delivery for Flat rate. 
Or disable Paypal for Local Pickup.
This WooCommerce addon is compatible with: 
* WooCommerce 3.5.2

WooCommerce – Shippings Payments Restrictions

Disable payment gateways for certain shipping method.

Freemius

Ivan Paulin

mensmaximus

This plugin gives you option to choose which payment gateway will be available in certain country, or countries.
If you need to have certain payment gateway to be available in all countries, don’t set option for it.
This WooCommerce addon is compatible with: 
* WooCommerce 8.5.2
NOTE: Backup your website before updating the plugin. Try to test a new version of the plugin on the staging server before using the plugin on a live site. 
This plugin comes as is; there’s no guarantee that it will work with all payment gateways available. 
I don’t have access to the premium version of payment gateways, and I haven’t tested this plugin with all payment gateways. 
Known payment gateways that this plugin does not work with: 
1. Amazon Payments 
2. PayPal Checkout

Country Based Payments for WooCommerce

Choose which payment gateway will be available in country/countries.

WooCommerce – Shippings Payments Restrictions vs Country Based Payments for WooCommerce